3D structure

PDB id
7O9K (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1, the MALSU module, GTPBP5 and mtEF-Tu
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
GCCCA*UACCCUCAC
Length
14 nucleotides
Bulged bases
7O9K|1|A|C|2414, 7O9K|1|A|C|2415, 7O9K|1|A|U|2416, 7O9K|1|A|C|2417
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7O9K|1|A|G|2377
7O9K|1|A|C|2378
7O9K|1|A|C|2379
7O9K|1|A|C|2380
7O9K|1|A|A|2381
*
7O9K|1|A|U|2411
7O9K|1|A|A|2412
7O9K|1|A|C|2413
7O9K|1|A|C|2414
7O9K|1|A|C|2415
7O9K|1|A|U|2416
7O9K|1|A|C|2417
7O9K|1|A|A|2418
7O9K|1|A|C|2419

Current chains

Chain A
16S rRNA

Nearby chains

Chain 5
39S ribosomal protein L37, mitochondrial
Chain 9
39S ribosomal protein L41, mitochondrial
Chain U
39S ribosomal protein L23, mitochondrial
Chain s
39S ribosomal protein S30, mitochondrial

Coloring options:

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