3D structure

PDB id
7O9M (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1 and the MALSU module
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
CUAAACC*GAUGAAAAAACCAAG
Length
22 nucleotides
Bulged bases
7O9M|1|A|A|1804, 7O9M|1|A|A|1811
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7O9M|1|A|C|1672
7O9M|1|A|U|1673
7O9M|1|A|A|1674
7O9M|1|A|A|1675
7O9M|1|A|A|1676
7O9M|1|A|C|1677
7O9M|1|A|C|1678
*
7O9M|1|A|G|1797
7O9M|1|A|A|1798
7O9M|1|A|U|1799
7O9M|1|A|G|1800
7O9M|1|A|A|1801
7O9M|1|A|A|1802
7O9M|1|A|A|1803
7O9M|1|A|A|1804
7O9M|1|A|A|1805
7O9M|1|A|A|1811
7O9M|1|A|C|1812
7O9M|1|A|C|1813
7O9M|1|A|A|1814
7O9M|1|A|A|1815
7O9M|1|A|G|1816

Current chains

Chain A
16S rRNA

Nearby chains

Chain 0
39S ribosomal protein L32, mitochondrial
Chain R
39S ribosomal protein L20, mitochondrial
Chain T
39S ribosomal protein L22, mitochondrial
Chain V
39S ribosomal protein L24, mitochondrial
Chain Y
39S ribosomal protein L47, mitochondrial
Chain c
39S ribosomal protein L44, mitochondrial
Chain d
39S ribosomal protein L45, mitochondrial
Chain i
39S ribosomal protein L51, mitochondrial

Coloring options:

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