IL_7ODE_016

3D structure

PDB id

7ODE (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome LiCl core particle

Experimental method

ELECTRON MICROSCOPY

Resolution

2.84 Å

Loop

Sequence

CCGAAAC*GAGAUAGUG

Length

16 nucleotides

Bulged bases

7ODE|1|I|G|801, 7ODE|1|I|U|807

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ODE|1|I|C|672
7ODE|1|I|C|673
7ODE|1|I|G|674
7ODE|1|I|A|675
7ODE|1|I|A|676
7ODE|1|I|A|677
7ODE|1|I|C|678
*
7ODE|1|I|G|799
7ODE|1|I|A|800
7ODE|1|I|G|801
7ODE|1|I|A|802
7ODE|1|I|U|803
7ODE|1|I|A|804
7ODE|1|I|G|805
7ODE|1|I|U|807
7ODE|1|I|G|808

Current chains

Chain I

23S rRNA

Nearby chains

Chain M

50S ribosomal protein L4