IL_7ODS_006
3D structure
- PDB id
- 7ODS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State B of the human mitoribosomal large subunit assembly intermediate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CCG*CUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ODS_006 not in the Motif Atlas
- Homologous match to IL_4WF9_020
- Geometric discrepancy: 0.1191
- The information below is about IL_4WF9_020
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.4
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 215
Unit IDs
7ODS|1|A|C|1904
7ODS|1|A|C|1905
7ODS|1|A|G|1906
*
7ODS|1|A|C|2016
7ODS|1|A|U|2017
7ODS|1|A|G|2018
Current chains
- Chain A
- 16S mitochondrial rRNA, DNA (30-MER),16S mitochondrial rRNA
Nearby chains
- Chain F
- 39S ribosomal protein L4, mitochondrial
- Chain M
- 39S ribosomal protein L15, mitochondrial
- Chain i
- 39S ribosomal protein L51, mitochondrial
Coloring options: