IL_7OF1_025
3D structure
- PDB id
- 7OF1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particle population A from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAU*AUUUG
- Length
- 9 nucleotides
- Bulged bases
- 7OF1|1|1|U|776
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OF1_025 not in the Motif Atlas
- Geometric match to IL_1D4R_001
- Geometric discrepancy: 0.3408
- The information below is about IL_1D4R_001
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
7OF1|1|1|C|753
7OF1|1|1|G|754
7OF1|1|1|A|755
7OF1|1|1|U|756
*
7OF1|1|1|A|775
7OF1|1|1|U|776
7OF1|1|1|U|777
7OF1|1|1|U|778
7OF1|1|1|G|779
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain a
- 60S ribosomal protein L28
Coloring options: