3D structure

PDB id
7OF1 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Nog1-TAP associated immature ribosomal particle population A from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
CGG*UUUG
Length
7 nucleotides
Bulged bases
7OF1|1|1|U|3382
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7OF1_119 not in the Motif Atlas
Geometric match to IL_7A0S_112
Geometric discrepancy: 0.2453
The information below is about IL_7A0S_112
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_07785.1
Basepair signature
cWW-cWW-cWW
Number of instances in this motif group
33

Unit IDs

7OF1|1|1|C|3324
7OF1|1|1|G|3325
7OF1|1|1|G|3326
*
7OF1|1|1|U|3380
7OF1|1|1|U|3381
7OF1|1|1|U|3382
7OF1|1|1|G|3383

Current chains

Chain 1
25S rRNA

Nearby chains

Chain B
60S ribosomal protein L3
Chain d
60S ribosomal protein L31-A

Coloring options:


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