3D structure

PDB id
7OF2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with GTPBP6.
Experimental method
ELECTRON MICROSCOPY
Resolution
2.7 Å

Loop

Sequence
GUACAUG*CGAACC
Length
13 nucleotides
Bulged bases
None detected
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OF2|1|A|G|2849
7OF2|1|A|U|2850
7OF2|1|A|A|2851
7OF2|1|A|C|2852
7OF2|1|A|A|2853
7OF2|1|A|U|2854
7OF2|1|A|G|2855
*
7OF2|1|A|C|2877
7OF2|1|A|G|2878
7OF2|1|A|A|2879
7OF2|1|A|A|2880
7OF2|1|A|C|2881
7OF2|1|A|C|2889

Current chains

Chain A
16S ribosomal RNA

Nearby chains

Chain 1
39S ribosomal protein L33, mitochondrial
Chain 3
39S ribosomal protein L35, mitochondrial
Chain P
39S ribosomal protein L18, mitochondrial
Chain W
39S ribosomal protein L27, mitochondrial
Chain q
Growth arrest and DNA damage-inducible proteins-interacting protein 1

Coloring options:

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