IL_7OF2_041
3D structure
- PDB id
- 7OF2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with GTPBP6.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- AUC*GGUUU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OF2_041 not in the Motif Atlas
- Homologous match to IL_7RQB_094
- Geometric discrepancy: 0.1109
- The information below is about IL_7RQB_094
- Detailed Annotation
- Major groove minor groove platform with extra cWW
- Broad Annotation
- Major groove minor groove platform; mini C-loop
- Motif group
- IL_92788.2
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 14
Unit IDs
7OF2|1|A|A|2946
7OF2|1|A|U|2947
7OF2|1|A|C|2948
*
7OF2|1|A|G|2976
7OF2|1|A|G|2977
7OF2|1|A|U|2978
7OF2|1|A|U|2979
7OF2|1|A|U|2980
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain C
- Putative GTP-binding protein 6
- Chain I
- 39S ribosomal protein L10, mitochondrial
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain o
- Ribosomal protein 63, mitochondrial
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