3D structure

PDB id
7OF3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset2).
Experimental method
ELECTRON MICROSCOPY
Resolution
2.7 Å

Loop

Sequence
GCCCA*UACCCUCAC
Length
14 nucleotides
Bulged bases
7OF3|1|A|C|2414, 7OF3|1|A|C|2415, 7OF3|1|A|U|2416, 7OF3|1|A|C|2417
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OF3|1|A|G|2377
7OF3|1|A|C|2378
7OF3|1|A|C|2379
7OF3|1|A|C|2380
7OF3|1|A|A|2381
*
7OF3|1|A|U|2411
7OF3|1|A|A|2412
7OF3|1|A|C|2413
7OF3|1|A|C|2414
7OF3|1|A|C|2415
7OF3|1|A|U|2416
7OF3|1|A|C|2417
7OF3|1|A|A|2418
7OF3|1|A|C|2419

Current chains

Chain A
16S ribosomal RNA

Nearby chains

Chain 5
39S ribosomal protein L37, mitochondrial
Chain 9
39S ribosomal protein L41, mitochondrial
Chain U
39S ribosomal protein L23, mitochondrial
Chain s
39S ribosomal protein S30, mitochondrial

Coloring options:

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