IL_7OF4_045
3D structure
- PDB id
- 7OF4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 1).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UAG*CA
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OF4_045 not in the Motif Atlas
- Geometric match to IL_4V88_388
- Geometric discrepancy: 0.2475
- The information below is about IL_4V88_388
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_18604.1
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 46
Unit IDs
7OF4|1|A|U|2955
7OF4|1|A|A|2956
7OF4|1|A|G|2957
*
7OF4|1|A|C|2967
7OF4|1|A|A|2968
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain 4
- 39S ribosomal protein L36, mitochondrial
- Chain C
- Putative GTP-binding protein 6
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain l
- 39S ribosomal protein L54, mitochondrial
Coloring options: