IL_7OF4_047

3D structure

PDB id

7OF4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 1).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CA*UACG

Length

6 nucleotides

Bulged bases

7OF4|1|A|A|3059, 7OF4|1|A|C|3060

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OF4_047 not in the Motif Atlas

Homologous match to IL_5J7L_341

Geometric discrepancy: 0.0929

The information below is about IL_5J7L_341

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_42626.2

Basepair signature

cWW-cWW

Number of instances in this motif group

14

Unit IDs

7OF4|1|A|C|2999
7OF4|1|A|A|3000
*
7OF4|1|A|U|3058
7OF4|1|A|A|3059
7OF4|1|A|C|3060
7OF4|1|A|G|3061

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain C

Putative GTP-binding protein 6

Chain E

39S ribosomal protein L3, mitochondrial

Chain K

39S ribosomal protein L13, mitochondrial