3D structure

PDB id
7OF4 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 1).
Experimental method
ELECTRON MICROSCOPY
Resolution
2.7 Å

Loop

Sequence
AUCUACAAUCAACCAAC*GUCAUU
Length
23 nucleotides
Bulged bases
7OF4|1|A|C|2393, 7OF4|1|A|A|2406
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OF4|1|A|A|2384
7OF4|1|A|U|2385
7OF4|1|A|C|2386
7OF4|1|A|U|2387
7OF4|1|A|A|2388
7OF4|1|A|C|2389
7OF4|1|A|A|2390
7OF4|1|A|A|2391
7OF4|1|A|U|2392
7OF4|1|A|C|2393
7OF4|1|A|A|2394
7OF4|1|A|A|2395
7OF4|1|A|C|2396
7OF4|1|A|C|2397
7OF4|1|A|A|2398
7OF4|1|A|A|2399
7OF4|1|A|C|2400
*
7OF4|1|A|G|2403
7OF4|1|A|U|2404
7OF4|1|A|C|2405
7OF4|1|A|A|2406
7OF4|1|A|U|2407
7OF4|1|A|U|2408

Current chains

Chain A
16S ribosomal RNA

Nearby chains

Chain 5
39S ribosomal protein L37, mitochondrial
Chain D
39S ribosomal protein L2, mitochondrial
Chain s
39S ribosomal protein S30, mitochondrial

Coloring options:

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