3D structure

PDB id
7OF5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset2).
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
AUCUACAAUCAACCAAC*GUCAUU
Length
23 nucleotides
Bulged bases
7OF5|1|A|C|2393, 7OF5|1|A|A|2406
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OF5|1|A|A|2384
7OF5|1|A|U|2385
7OF5|1|A|C|2386
7OF5|1|A|U|2387
7OF5|1|A|A|2388
7OF5|1|A|C|2389
7OF5|1|A|A|2390
7OF5|1|A|A|2391
7OF5|1|A|U|2392
7OF5|1|A|C|2393
7OF5|1|A|A|2394
7OF5|1|A|A|2395
7OF5|1|A|C|2396
7OF5|1|A|C|2397
7OF5|1|A|A|2398
7OF5|1|A|A|2399
7OF5|1|A|C|2400
*
7OF5|1|A|G|2403
7OF5|1|A|U|2404
7OF5|1|A|C|2405
7OF5|1|A|A|2406
7OF5|1|A|U|2407
7OF5|1|A|U|2408

Current chains

Chain A
16S ribosomal RNA

Nearby chains

Chain 5
39S ribosomal protein L37, mitochondrial
Chain D
39S ribosomal protein L2, mitochondrial
Chain s
39S ribosomal protein S30, mitochondrial

Coloring options:

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