IL_7OF7_045
3D structure
- PDB id
- 7OF7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset1).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- CCCUGUAC*GGACAAG
- Length
- 15 nucleotides
- Bulged bases
- 7OF7|1|A|G|3123
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OF7_045 not in the Motif Atlas
- Geometric match to IL_5J7L_289
- Geometric discrepancy: 0.3931
- The information below is about IL_5J7L_289
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.10
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
7OF7|1|A|C|3119
7OF7|1|A|C|3120
7OF7|1|A|C|3121
7OF7|1|A|U|3122
7OF7|1|A|G|3123
7OF7|1|A|U|3124
7OF7|1|A|A|3125
7OF7|1|A|C|3126
*
7OF7|1|A|G|3131
7OF7|1|A|G|3132
7OF7|1|A|A|3133
7OF7|1|A|C|3134
7OF7|1|A|A|3135
7OF7|1|A|A|3136
7OF7|1|A|G|3137
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain L
- 39S ribosomal protein L14, mitochondrial
- Chain u
- Mitochondrial assembly of ribosomal large subunit protein 1
- Chain x
- Mitochondrial ribosome-associated GTPase 2
Coloring options: