IL_7OG4_107

3D structure

PDB id

7OG4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with P/E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

AUAUC*GCCCU

Length

10 nucleotides

Bulged bases

7OG4|1|AA|U|1187, 7OG4|1|AA|A|1188, 7OG4|1|AA|U|1189

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OG4_107 not in the Motif Atlas

Geometric match to IL_8P9A_431

Geometric discrepancy: 0.2837

The information below is about IL_8P9A_431

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_63596.12

Basepair signature

cWW-cWS-cSH-tWH-cWW-L

Number of instances in this motif group

22

Unit IDs

7OG4|1|AA|A|1186
7OG4|1|AA|U|1187
7OG4|1|AA|A|1188
7OG4|1|AA|U|1189
7OG4|1|AA|C|1190
*
7OG4|1|AA|G|1464
7OG4|1|AA|C|1465
7OG4|1|AA|C|1466
7OG4|1|AA|C|1467
7OG4|1|AA|U|1468

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain A2

Coiled-coil-helix-coiled-coil-helix domain-containing protein 1

Chain AF

28S ribosomal protein S7, mitochondrial

Chain AG

28S ribosomal protein S9, mitochondrial