IL_7OG4_108

3D structure

PDB id

7OG4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with P/E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UAUA*UG

Length

6 nucleotides

Bulged bases

7OG4|1|AA|A|1258, 7OG4|1|AA|U|1259

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OG4_108 not in the Motif Atlas

Geometric match to IL_1FUF_002

Geometric discrepancy: 0.3908

The information below is about IL_1FUF_002

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_82107.5

Basepair signature

cWW-cWW

Number of instances in this motif group

31

Unit IDs

7OG4|1|AA|U|1257
7OG4|1|AA|A|1258
7OG4|1|AA|U|1259
7OG4|1|AA|A|1260
*
7OG4|1|AA|U|1335
7OG4|1|AA|G|1336

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AD

28S ribosomal protein S5, mitochondrial

Chain AH

28S ribosomal protein S10, mitochondrial

Chain AZ

28S ribosomal protein S33, mitochondrial