IL_7OH3_025

3D structure

PDB id

7OH3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particle population B from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AUC*GAUU

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OH3_025 not in the Motif Atlas

Geometric match to IL_4V9F_053

Geometric discrepancy: 0.3086

The information below is about IL_4V9F_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_09990.4

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

7OH3|1|1|A|755
7OH3|1|1|U|756
7OH3|1|1|C|757
*
7OH3|1|1|G|774
7OH3|1|1|A|775
7OH3|1|1|U|776
7OH3|1|1|U|777

Current chains

Chain 1

25S rRNA

Nearby chains