IL_7OHP_026

3D structure

PDB id

7OHP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GAAAG*CUAGUAC

Length

12 nucleotides

Bulged bases

7OHP|1|1|A|933

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHP|1|1|G|805
7OHP|1|1|A|806
7OHP|1|1|A|807
7OHP|1|1|A|808
7OHP|1|1|G|809
*
7OHP|1|1|C|931
7OHP|1|1|U|932
7OHP|1|1|A|933
7OHP|1|1|G|934
7OHP|1|1|U|935
7OHP|1|1|A|936
7OHP|1|1|C|938

Current chains

Chain 1

25S rRNA

Nearby chains

Chain C

60S ribosomal protein L4-A

Chain j

60S ribosomal protein L37-A