IL_7OHP_060

3D structure

PDB id

7OHP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

AUUGUAAG*CUGAGAU

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHP|1|1|A|3330
7OHP|1|1|U|3331
7OHP|1|1|U|3332
7OHP|1|1|G|3333
7OHP|1|1|U|3334
7OHP|1|1|A|3335
7OHP|1|1|A|3336
7OHP|1|1|G|3337
*
7OHP|1|1|C|3367
7OHP|1|1|U|3368
7OHP|1|1|G|3369
7OHP|1|1|A|3370
7OHP|1|1|G|3371
7OHP|1|1|A|3372
7OHP|1|1|U|3373

Current chains

Chain 1

25S rRNA

Nearby chains

Chain B

60S ribosomal protein L3

Chain b

Nucleolar GTP-binding protein 1