IL_7OHQ_028

3D structure

PDB id

7OHQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particle population C from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAAAG*CUAGUAGC

Length

13 nucleotides

Bulged bases

7OHQ|1|1|A|933

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHQ|1|1|G|805
7OHQ|1|1|A|806
7OHQ|1|1|A|807
7OHQ|1|1|A|808
7OHQ|1|1|G|809
*
7OHQ|1|1|C|931
7OHQ|1|1|U|932
7OHQ|1|1|A|933
7OHQ|1|1|G|934
7OHQ|1|1|U|935
7OHQ|1|1|A|936
7OHQ|1|1|G|937
7OHQ|1|1|C|938

Current chains

Chain 1

25S rRNA

Nearby chains

Chain C

60S ribosomal protein L4-A

Chain L

60S ribosomal protein L13-A

Chain N

60S ribosomal protein L15-A

Chain j

60S ribosomal protein L37-A

Chain m

Nucleolar GTP-binding protein 2