IL_7OHQ_090

3D structure

PDB id

7OHQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particle population C from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUCU*AGUGAG

Length

10 nucleotides

Bulged bases

7OHQ|1|1|G|2945, 7OHQ|1|1|A|2946

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHQ|1|1|C|2879
7OHQ|1|1|U|2880
7OHQ|1|1|C|2881
7OHQ|1|1|U|2882
*
7OHQ|1|1|A|2940
7OHQ|1|1|G|2943
7OHQ|1|1|U|2944
7OHQ|1|1|G|2945
7OHQ|1|1|A|2946
7OHQ|1|1|G|2947

Current chains

Chain 1

25S rRNA

Nearby chains

Chain B

60S ribosomal protein L3

Chain O

60S ribosomal protein L16-A

Chain V

60S ribosomal protein L23-A

Chain b

Nucleolar GTP-binding protein 1