IL_7OHQ_130

3D structure

PDB id

7OHQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particle population C from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UGCCGGAAUAC*GUUA

Length

15 nucleotides

Bulged bases

7OHQ|1|1|U|1181

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHQ|1|1|U|1173
7OHQ|1|1|G|1174
7OHQ|1|1|C|1175
7OHQ|1|1|C|1176
7OHQ|1|1|G|1177
7OHQ|1|1|G|1178
7OHQ|1|1|A|1179
7OHQ|1|1|A|1180
7OHQ|1|1|U|1181
7OHQ|1|1|A|1182
7OHQ|1|1|C|1183
*
7OHQ|1|1|G|1323
7OHQ|1|1|U|1324
7OHQ|1|1|U|1325
7OHQ|1|1|A|1326

Current chains

Chain 1

25S rRNA

Nearby chains

Chain F

60S ribosomal protein L7-A

Chain M

60S ribosomal protein L14-A

Chain O

60S ribosomal protein L16-A

Chain S

60S ribosomal protein L20-A

Chain f

60S ribosomal protein L33-A