IL_7OHQ_131

3D structure

PDB id

7OHQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particle population C from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGGUGGC*GAAUCCG

Length

14 nucleotides

Bulged bases

7OHQ|1|1|G|1236

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHQ|1|1|C|1232
7OHQ|1|1|G|1233
7OHQ|1|1|G|1234
7OHQ|1|1|U|1235
7OHQ|1|1|G|1236
7OHQ|1|1|G|1237
7OHQ|1|1|C|1238
*
7OHQ|1|1|G|1250
7OHQ|1|1|A|1251
7OHQ|1|1|A|1252
7OHQ|1|1|U|1253
7OHQ|1|1|C|1254
7OHQ|1|1|C|1255
7OHQ|1|1|G|1256

Current chains

Chain 1

25S rRNA

Nearby chains

Chain W

Ribosome assembly factor MRT4

Chain m

Nucleolar GTP-binding protein 2

Chain r

Ribosome biogenesis protein NSA2

Chain x

Ribosome assembly protein 4