IL_7OHR_032

3D structure

PDB id

7OHR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particle population E from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.72 Å

Loop

Sequence

UU*AGA

Length

5 nucleotides

Bulged bases

7OHR|1|1|G|1097

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OHR_032 not in the Motif Atlas

Geometric match to IL_6CZR_148

Geometric discrepancy: 0.3869

The information below is about IL_6CZR_148

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.12

Basepair signature

cWW-L-cWW

Number of instances in this motif group

52

Unit IDs

7OHR|1|1|U|986
7OHR|1|1|U|987
*
7OHR|1|1|A|1062
7OHR|1|1|G|1097
7OHR|1|1|A|1098

Current chains

Chain 1

25S rRNA

Nearby chains

Chain F

60S ribosomal protein L7-A