IL_7OHR_066

3D structure

PDB id

7OHR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particle population E from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.72 Å

Loop

Sequence

UGAGC*GUUACCA

Length

12 nucleotides

Bulged bases

7OHR|1|1|A|2808, 7OHR|1|1|C|2809

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHR|1|1|U|2411
7OHR|1|1|G|2412
7OHR|1|1|A|2413
7OHR|1|1|G|2414
7OHR|1|1|C|2415
*
7OHR|1|1|G|2805
7OHR|1|1|U|2806
7OHR|1|1|U|2807
7OHR|1|1|A|2808
7OHR|1|1|C|2809
7OHR|1|1|C|2810
7OHR|1|1|A|2811

Current chains

Chain 1

25S rRNA

Nearby chains

Chain J

rRNA-processing protein EBP2

Chain l

60S ribosome subunit biogenesis protein NIP7

Chain q

25S rRNA (cytosine(2870)-C(5))-methyltransferase

Chain r

Ribosome biogenesis protein NSA2