IL_7OHR_067

3D structure

PDB id

7OHR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particle population E from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.72 Å

Loop

Sequence

UUGAC*GUAAA

Length

10 nucleotides

Bulged bases

7OHR|1|1|G|2418, 7OHR|1|1|A|2419

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHR|1|1|U|2416
7OHR|1|1|U|2417
7OHR|1|1|G|2418
7OHR|1|1|A|2419
7OHR|1|1|C|2420
*
7OHR|1|1|G|2610
7OHR|1|1|U|2611
7OHR|1|1|A|2802
7OHR|1|1|A|2803
7OHR|1|1|A|2804

Current chains

Chain 1

25S rRNA

Nearby chains

Chain l

60S ribosome subunit biogenesis protein NIP7

Chain q

25S rRNA (cytosine(2870)-C(5))-methyltransferase