IL_7OHR_097
3D structure
- PDB id
- 7OHR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particle population E from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.72 Å
Loop
- Sequence
- UGA*UUGAA
- Length
- 8 nucleotides
- Bulged bases
- 7OHR|1|6|G|52, 7OHR|1|6|A|53
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OHR_097 not in the Motif Atlas
- Geometric match to IL_6CZR_128
- Geometric discrepancy: 0.3637
- The information below is about IL_6CZR_128
- Detailed Annotation
- Single bulged G, near cWW
- Broad Annotation
- Single bulged G, near cWW
- Motif group
- IL_52767.5
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 28
Unit IDs
7OHR|1|6|U|26
7OHR|1|6|G|27
7OHR|1|6|A|28
*
7OHR|1|6|U|50
7OHR|1|6|U|51
7OHR|1|6|G|52
7OHR|1|6|A|53
7OHR|1|6|A|54
Current chains
- Chain 6
- ITS2
Nearby chains
- Chain D
- ATP-dependent RNA helicase HAS1
- Chain G
- 60S ribosomal protein L8-A
- Chain K
- Proteasome-interacting protein CIC1
- Chain o
- Ribosome biogenesis protein 15
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