IL_7OHV_009

3D structure

PDB id

7OHV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UGG*CUUUGUA

Length

10 nucleotides

Bulged bases

7OHV|1|1|U|252

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHV|1|1|U|169
7OHV|1|1|G|170
7OHV|1|1|G|171
*
7OHV|1|1|C|247
7OHV|1|1|U|248
7OHV|1|1|U|249
7OHV|1|1|U|250
7OHV|1|1|G|251
7OHV|1|1|U|252
7OHV|1|1|A|253

Current chains

Chain 1

25S rRNA

Nearby chains

Chain G

60S ribosomal protein L8-A

Chain L

60S ribosomal protein L13-A

Chain h

60S ribosomal protein L35-A

Chain m

Ribosome biogenesis protein ERB1

Chain v

Nucleolar protein 16