IL_7OHV_035
3D structure
- PDB id
- 7OHV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GACAAAAG*CUGAAGGAUGGCGC
- Length
- 22 nucleotides
- Bulged bases
- 7OHV|1|1|A|1301, 7OHV|1|1|A|1302, 7OHV|1|1|G|1306
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OHV|1|1|G|1194
7OHV|1|1|A|1195
7OHV|1|1|C|1201
7OHV|1|1|A|1202
7OHV|1|1|A|1203
7OHV|1|1|A|1204
7OHV|1|1|A|1205
7OHV|1|1|G|1206
*
7OHV|1|1|C|1298
7OHV|1|1|U|1299
7OHV|1|1|G|1300
7OHV|1|1|A|1301
7OHV|1|1|A|1302
7OHV|1|1|G|1306
7OHV|1|1|G|1307
7OHV|1|1|A|1308
7OHV|1|1|U|1309
7OHV|1|1|G|1310
7OHV|1|1|G|1311
7OHV|1|1|C|1312
7OHV|1|1|G|1313
7OHV|1|1|C|1314
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain O
- 60S ribosomal protein L16-A
- Chain S
- 60S ribosomal protein L20-A
- Chain W
- Ribosome assembly factor MRT4
- Chain b
- Nucleolar GTP-binding protein 1
- Chain f
- 60S ribosomal protein L33-A
- Chain r
- Ribosome biogenesis protein NSA2
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