IL_7OHV_096

3D structure

PDB id

7OHV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CGGUGGC*GAAUCCG

Length

14 nucleotides

Bulged bases

7OHV|1|1|G|1236

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHV|1|1|C|1232
7OHV|1|1|G|1233
7OHV|1|1|G|1234
7OHV|1|1|U|1235
7OHV|1|1|G|1236
7OHV|1|1|G|1237
7OHV|1|1|C|1238
*
7OHV|1|1|G|1250
7OHV|1|1|A|1251
7OHV|1|1|A|1252
7OHV|1|1|U|1253
7OHV|1|1|C|1254
7OHV|1|1|C|1255
7OHV|1|1|G|1256

Current chains

Chain 1

25S rRNA

Nearby chains

Chain W

Ribosome assembly factor MRT4

Chain r

Ribosome biogenesis protein NSA2