IL_7OI7_014
3D structure
- PDB id
- 7OI7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CCCACAG*CCCCUUG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OI7_014 not in the Motif Atlas
- Geometric match to IL_5XWG_002
- Geometric discrepancy: 0.2594
- The information below is about IL_5XWG_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04600.1
- Basepair signature
- cWW-cWW-L-R-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
7OI7|1|A|C|387
7OI7|1|A|C|388
7OI7|1|A|C|389
7OI7|1|A|A|390
7OI7|1|A|C|391
7OI7|1|A|A|392
7OI7|1|A|G|393
*
7OI7|1|A|C|406
7OI7|1|A|C|407
7OI7|1|A|C|408
7OI7|1|A|C|409
7OI7|1|A|U|410
7OI7|1|A|U|411
7OI7|1|A|G|412
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 6
- 39S ribosomal protein L38, mitochondrial
- Chain W
- 39S ribosomal protein L27, mitochondrial
- Chain Z
- 39S ribosomal protein L30, mitochondrial
- Chain f
- 39S ribosomal protein L48, mitochondrial
- Chain j
- 39S ribosomal protein L52, mitochondrial
- Chain o
- Ribosomal protein 63, mitochondrial
Coloring options: