IL_7OI7_035
3D structure
- PDB id
- 7OI7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CCA*UAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OI7_035 not in the Motif Atlas
- Geometric match to IL_4E59_001
- Geometric discrepancy: 0.1787
- The information below is about IL_4E59_001
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_01003.4
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 215
Unit IDs
7OI7|1|B|C|1627
7OI7|1|B|C|1628
7OI7|1|B|A|1629
*
7OI7|1|B|U|1639
7OI7|1|B|A|1640
7OI7|1|B|G|1641
Current chains
- Chain B
- mitochondrial Val tRNA
Nearby chains
- Chain 6
- 39S ribosomal protein L38, mitochondrial
- Chain 8
- 39S ribosomal protein L40, mitochondrial
- Chain P
- 39S ribosomal protein L18, mitochondrial
- Chain e
- 39S ribosomal protein L46, mitochondrial
- Chain f
- 39S ribosomal protein L48, mitochondrial
- Chain m
- 39S ribosomal protein L55, mitochondrial
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