IL_7OI7_039
3D structure
- PDB id
- 7OI7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UAAG*CAAA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OI7_039 not in the Motif Atlas
- Geometric match to IL_4KZD_002
- Geometric discrepancy: 0.2535
- The information below is about IL_4KZD_002
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.1
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 44
Unit IDs
7OI7|1|A|U|1187
7OI7|1|A|A|1188
7OI7|1|A|A|1189
7OI7|1|A|G|1190
*
7OI7|1|A|C|1202
7OI7|1|A|A|1203
7OI7|1|A|A|1204
7OI7|1|A|A|1205
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 3
- 39S ribosomal protein L35, mitochondrial
- Chain 6
- 39S ribosomal protein L38, mitochondrial
- Chain P
- 39S ribosomal protein L18, mitochondrial
- Chain W
- 39S ribosomal protein L27, mitochondrial
Coloring options: