3D structure

PDB id
7OIA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3C
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
GUACAUG*CGAACC
Length
13 nucleotides
Bulged bases
None detected
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OIA|1|A|G|1179
7OIA|1|A|U|1180
7OIA|1|A|A|1181
7OIA|1|A|C|1182
7OIA|1|A|A|1183
7OIA|1|A|U|1184
7OIA|1|A|G|1185
*
7OIA|1|A|C|1207
7OIA|1|A|G|1208
7OIA|1|A|A|1209
7OIA|1|A|A|1210
7OIA|1|A|C|1211
7OIA|1|A|C|1219

Current chains

Chain A
16S rRNA

Nearby chains

Chain 1
39S ribosomal protein L33, mitochondrial
Chain 3
39S ribosomal protein L35, mitochondrial
Chain P
39S ribosomal protein L18, mitochondrial
Chain W
39S ribosomal protein L27, mitochondrial
Chain p
Peptidyl-tRNA hydrolase ICT1, mitochondrial
Chain q
Growth arrest and DNA damage-inducible proteins-interacting protein 1

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