3D structure

PDB id
7OIB (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3D
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
CUAAACC*GAUGAAAAAUACCAAG
Length
23 nucleotides
Bulged bases
7OIB|1|A|A|134, 7OIB|1|A|A|141
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OIB|1|A|C|2
7OIB|1|A|U|3
7OIB|1|A|A|4
7OIB|1|A|A|5
7OIB|1|A|A|6
7OIB|1|A|C|7
7OIB|1|A|C|8
*
7OIB|1|A|G|127
7OIB|1|A|A|128
7OIB|1|A|U|129
7OIB|1|A|G|130
7OIB|1|A|A|131
7OIB|1|A|A|132
7OIB|1|A|A|133
7OIB|1|A|A|134
7OIB|1|A|A|135
7OIB|1|A|U|136
7OIB|1|A|A|141
7OIB|1|A|C|142
7OIB|1|A|C|143
7OIB|1|A|A|144
7OIB|1|A|A|145
7OIB|1|A|G|146

Current chains

Chain A
16S rRNA

Nearby chains

Chain 0
39S ribosomal protein L32, mitochondrial
Chain R
39S ribosomal protein L20, mitochondrial
Chain T
39S ribosomal protein L22, mitochondrial
Chain U
39S ribosomal protein L23, mitochondrial
Chain V
39S ribosomal protein L24, mitochondrial
Chain Y
39S ribosomal protein L47, mitochondrial
Chain c
39S ribosomal protein L44, mitochondrial
Chain d
39S ribosomal protein L45, mitochondrial
Chain i
39S ribosomal protein L51, mitochondrial

Coloring options:

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