3D structure

PDB id
7OIB (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3D
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
GUACAUG*CGAACC
Length
13 nucleotides
Bulged bases
None detected
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OIB|1|A|G|1179
7OIB|1|A|U|1180
7OIB|1|A|A|1181
7OIB|1|A|C|1182
7OIB|1|A|A|1183
7OIB|1|A|U|1184
7OIB|1|A|G|1185
*
7OIB|1|A|C|1207
7OIB|1|A|G|1208
7OIB|1|A|A|1209
7OIB|1|A|A|1210
7OIB|1|A|C|1211
7OIB|1|A|C|1219

Current chains

Chain A
16S rRNA

Nearby chains

Chain 1
39S ribosomal protein L33, mitochondrial
Chain 3
39S ribosomal protein L35, mitochondrial
Chain P
39S ribosomal protein L18, mitochondrial
Chain W
39S ribosomal protein L27, mitochondrial
Chain q
Growth arrest and DNA damage-inducible proteins-interacting protein 1

Coloring options:

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