3D structure

PDB id
7OIB (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3D
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
AUCUACAAUCAACCAAC*GUCAUU
Length
23 nucleotides
Bulged bases
7OIB|1|A|C|723, 7OIB|1|A|U|734, 7OIB|1|A|C|735, 7OIB|1|A|A|736
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OIB|1|A|A|714
7OIB|1|A|U|715
7OIB|1|A|C|716
7OIB|1|A|U|717
7OIB|1|A|A|718
7OIB|1|A|C|719
7OIB|1|A|A|720
7OIB|1|A|A|721
7OIB|1|A|U|722
7OIB|1|A|C|723
7OIB|1|A|A|724
7OIB|1|A|A|725
7OIB|1|A|C|726
7OIB|1|A|C|727
7OIB|1|A|A|728
7OIB|1|A|A|729
7OIB|1|A|C|730
*
7OIB|1|A|G|733
7OIB|1|A|U|734
7OIB|1|A|C|735
7OIB|1|A|A|736
7OIB|1|A|U|737
7OIB|1|A|U|738

Current chains

Chain A
16S rRNA

Nearby chains

Chain 5
39S ribosomal protein L37, mitochondrial
Chain D
39S ribosomal protein L2, mitochondrial
Chain s
39S ribosomal protein S30, mitochondrial

Coloring options:

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