3D structure

PDB id
7OID (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5A
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
GCCCA*UACCCUCAC
Length
14 nucleotides
Bulged bases
7OID|1|A|C|744, 7OID|1|A|C|745
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OID|1|A|G|707
7OID|1|A|C|708
7OID|1|A|C|709
7OID|1|A|C|710
7OID|1|A|A|711
*
7OID|1|A|U|741
7OID|1|A|A|742
7OID|1|A|C|743
7OID|1|A|C|744
7OID|1|A|C|745
7OID|1|A|U|746
7OID|1|A|C|747
7OID|1|A|A|748
7OID|1|A|C|749

Current chains

Chain A
16S rRNA

Nearby chains

Chain 5
39S ribosomal protein L37, mitochondrial
Chain 9
39S ribosomal protein L41, mitochondrial
Chain U
39S ribosomal protein L23, mitochondrial
Chain s
39S ribosomal protein S30, mitochondrial

Coloring options:

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