IL_7OID_032

3D structure

PDB id

7OID (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GC*GUAU

Length

6 nucleotides

Bulged bases

7OID|1|A|U|958, 7OID|1|A|A|959

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OID_032 not in the Motif Atlas

Geometric match to IL_7V9E_001

Geometric discrepancy: 0.1919

The information below is about IL_7V9E_001

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_82107.2

Basepair signature

cWW-cWW

Number of instances in this motif group

34

Unit IDs

7OID|1|A|G|926
7OID|1|A|C|927
*
7OID|1|A|G|957
7OID|1|A|U|958
7OID|1|A|A|959
7OID|1|A|U|960

Current chains

Chain A

16S rRNA

Nearby chains