IL_7OID_045
3D structure
- PDB id
- 7OID (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UCUAG*CAACA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OID_045 not in the Motif Atlas
- Homologous match to IL_5J7L_338
- Geometric discrepancy: 0.2489
- The information below is about IL_5J7L_338
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
7OID|1|A|U|1283
7OID|1|A|C|1284
7OID|1|A|U|1285
7OID|1|A|A|1286
7OID|1|A|G|1287
*
7OID|1|A|C|1297
7OID|1|A|A|1298
7OID|1|A|A|1299
7OID|1|A|C|1300
7OID|1|A|A|1301
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 4
- 39S ribosomal protein L36, mitochondrial
- Chain N
- 39S ribosomal protein L16, mitochondrial
Coloring options: