IL_7OIE_026
3D structure
- PDB id
- 7OIE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- ACUCGG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 7OIE|1|A|G|985
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OIE_026 not in the Motif Atlas
- Geometric match to IL_4WF9_065
- Geometric discrepancy: 0.1243
- The information below is about IL_4WF9_065
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_28217.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 10
Unit IDs
7OIE|1|A|A|803
7OIE|1|A|C|804
7OIE|1|A|U|805
7OIE|1|A|C|806
7OIE|1|A|G|807
7OIE|1|A|G|808
*
7OIE|1|A|C|983
7OIE|1|A|U|984
7OIE|1|A|G|985
7OIE|1|A|U|986
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain E
- 39S ribosomal protein L3, mitochondrial
- Chain L
- 39S ribosomal protein L14, mitochondrial
- Chain Q
- 39S ribosomal protein L19, mitochondrial
Coloring options: