IL_7OIE_031

3D structure

PDB id

7OIE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GC*GUAU

Length

6 nucleotides

Bulged bases

7OIE|1|A|U|958, 7OIE|1|A|A|959

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OIE_031 not in the Motif Atlas

Geometric match to IL_7V9E_001

Geometric discrepancy: 0.2295

The information below is about IL_7V9E_001

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_82107.2

Basepair signature

cWW-cWW

Number of instances in this motif group

34

Unit IDs

7OIE|1|A|G|926
7OIE|1|A|C|927
*
7OIE|1|A|G|957
7OIE|1|A|U|958
7OIE|1|A|A|959
7OIE|1|A|U|960

Current chains

Chain A

16S rRNA

Nearby chains