3D structure

PDB id
7OIE (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5B
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
GCCCA*UACCCUCAC
Length
14 nucleotides
Bulged bases
7OIE|1|A|C|744, 7OIE|1|A|C|745, 7OIE|1|A|U|746, 7OIE|1|A|C|747
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7OIE|1|A|G|707
7OIE|1|A|C|708
7OIE|1|A|C|709
7OIE|1|A|C|710
7OIE|1|A|A|711
*
7OIE|1|A|U|741
7OIE|1|A|A|742
7OIE|1|A|C|743
7OIE|1|A|C|744
7OIE|1|A|C|745
7OIE|1|A|U|746
7OIE|1|A|C|747
7OIE|1|A|A|748
7OIE|1|A|C|749

Current chains

Chain A
16S rRNA

Nearby chains

Chain 5
39S ribosomal protein L37, mitochondrial
Chain 9
39S ribosomal protein L41, mitochondrial
Chain U
39S ribosomal protein L23, mitochondrial
Chain s
39S ribosomal protein S30, mitochondrial

Coloring options:

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