IL_7OIF_009

3D structure

PDB id

7OIF (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-27 cotranslational folding intermediate 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OIF_009 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.2809

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

7OIF|1|1|C|274
7OIF|1|1|C|275
7OIF|1|1|U|276
7OIF|1|1|G|277
7OIF|1|1|A|278
7OIF|1|1|A|279
7OIF|1|1|U|280
7OIF|1|1|C|281
*
7OIF|1|1|G|359
7OIF|1|1|U|360
7OIF|1|1|G|361
7OIF|1|1|A|362
7OIF|1|1|G|363

Current chains

Chain 1

23S rRNA

Nearby chains