IL_7OIF_063
3D structure
- PDB id
- 7OIF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CspA-27 cotranslational folding intermediate 2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CGUAAC*GGAGAAG
- Length
- 13 nucleotides
- Bulged bases
- 7OIF|1|1|G|1699
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OIF_063 not in the Motif Atlas
- Geometric match to IL_5J7L_308
- Geometric discrepancy: 0.0732
- The information below is about IL_5J7L_308
- Detailed Annotation
- tSH-tSH-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_47346.2
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
7OIF|1|1|C|1686
7OIF|1|1|G|1687
7OIF|1|1|U|1688
7OIF|1|1|A|1689
7OIF|1|1|A|1690
7OIF|1|1|C|1691
*
7OIF|1|1|G|1696
7OIF|1|1|G|1697
7OIF|1|1|A|1698
7OIF|1|1|G|1699
7OIF|1|1|A|1700
7OIF|1|1|A|1701
7OIF|1|1|G|1702
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain C
- 50S ribosomal protein L2
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