IL_7OIG_033

3D structure

PDB id

7OIG (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-27 cotranslational folding intermediate 3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUAAG*CGAAG

Length

10 nucleotides

Bulged bases

7OIG|1|1|A|1156

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OIG_033 not in the Motif Atlas

Homologous match to IL_5J7L_277

Geometric discrepancy: 0.0869

The information below is about IL_5J7L_277

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_38507.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

16

Unit IDs

7OIG|1|1|C|998
7OIG|1|1|U|999
7OIG|1|1|A|1000
7OIG|1|1|A|1001
7OIG|1|1|G|1002
*
7OIG|1|1|C|1153
7OIG|1|1|G|1154
7OIG|1|1|A|1155
7OIG|1|1|A|1156
7OIG|1|1|G|1157

Current chains

Chain 1

23S rRNA

Nearby chains

Chain 3

5S ribosomal RNA; 5S rRNA

Chain P

50S ribosomal protein L20

Chain Q

50S ribosomal protein L21

Chain Y

50S ribosomal protein L30