3D structure

PDB id
7OIG (explore in PDB, NAKB, or RNA 3D Hub)
Description
CspA-27 cotranslational folding intermediate 3
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
ACUAGG*CUGU
Length
10 nucleotides
Bulged bases
7OIG|1|1|G|1992
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7OIG_063 not in the Motif Atlas
Homologous match to IL_4WF9_065
Geometric discrepancy: 0.0994
The information below is about IL_4WF9_065
Detailed Annotation
Intercalated tWH
Broad Annotation
Intercalated tWH
Motif group
IL_28217.1
Basepair signature
cWW-L-R-L-cWW-L-L
Number of instances in this motif group
10

Unit IDs

7OIG|1|1|A|1669
7OIG|1|1|C|1670
7OIG|1|1|U|1671
7OIG|1|1|A|1672
7OIG|1|1|G|1673
7OIG|1|1|G|1674
*
7OIG|1|1|C|1990
7OIG|1|1|U|1991
7OIG|1|1|G|1992
7OIG|1|1|U|1993

Current chains

Chain 1
23S rRNA

Nearby chains

Chain D
50S ribosomal protein L3
Chain J
50S ribosomal protein L14

Coloring options:


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