IL_7OIG_188

3D structure

PDB id

7OIG (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-27 cotranslational folding intermediate 3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GU(G7M)*CC

Length

5 nucleotides

Bulged bases

7OIG|1|1|U|2068

QA status

Modified nucleotides: G7M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OIG_188 not in the Motif Atlas

Homologous match to IL_4WF9_080

Geometric discrepancy: 0.1375

The information below is about IL_4WF9_080

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_89505.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

117

Unit IDs

7OIG|1|1|G|2067
7OIG|1|1|U|2068
7OIG|1|1|G7M|2069
*
7OIG|1|1|C|2442
7OIG|1|1|C|2443

Current chains

Chain 1

23S rRNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain K

50S ribosomal protein L15