IL_7OII_036
3D structure
- PDB id
- 7OII (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CspA-70 cotranslational folding intermediate 2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GGGAAAC*GGAAGAUGUAACGGGGC
- Length
- 24 nucleotides
- Bulged bases
- 7OII|1|1|A|1127, 7OII|1|1|U|1130
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OII_036 not in the Motif Atlas
- Geometric match to IL_5J7L_281
- Geometric discrepancy: 0.072
- The information below is about IL_5J7L_281
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_50715.3
- Basepair signature
- cWW-tSH-tHH-L-R-L-R-L-tWW-L-cWW-L-L-L-R-L
- Number of instances in this motif group
- 4
Unit IDs
7OII|1|1|G|1024
7OII|1|1|G|1025
7OII|1|1|G|1026
7OII|1|1|A|1027
7OII|1|1|A|1028
7OII|1|1|A|1029
7OII|1|1|C|1030
*
7OII|1|1|G|1124
7OII|1|1|G|1125
7OII|1|1|A|1126
7OII|1|1|A|1127
7OII|1|1|G|1128
7OII|1|1|A|1129
7OII|1|1|U|1130
7OII|1|1|G|1131
7OII|1|1|U|1132
7OII|1|1|A|1133
7OII|1|1|A|1134
7OII|1|1|C|1135
7OII|1|1|G|1136
7OII|1|1|G|1137
7OII|1|1|G|1138
7OII|1|1|G|1139
7OII|1|1|C|1140
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain I
- 50S ribosomal protein L13
- Chain L
- 50S ribosomal protein L16
- Chain e
- 50S ribosomal protein L36
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