3D structure

PDB id
7OII (explore in PDB, NAKB, or RNA 3D Hub)
Description
CspA-70 cotranslational folding intermediate 2
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
UG*CAAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7OII_056 not in the Motif Atlas
Homologous match to IL_5J7L_301
Geometric discrepancy: 0.2447
The information below is about IL_5J7L_301
Detailed Annotation
180 degree turn
Broad Annotation
No text annotation
Motif group
IL_00881.1
Basepair signature
cWW-L-cWW-L
Number of instances in this motif group
2

Unit IDs

7OII|1|1|U|1481
7OII|1|1|G|1482
*
7OII|1|1|C|1507
7OII|1|1|A|1508
7OII|1|1|A|1509
7OII|1|1|G|1510

Current chains

Chain 1
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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